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blog:gff [2017/01/27 11:22]
thoelken
blog:gff [2018/01/04 14:18] (current)
thoelken
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 - https://​github.com/​gpertea/​gffread - https://​github.com/​gpertea/​gffread
 +
 +A glimmer of light seems to be the python package `gffutils`:
 +
 +- https://​pypi.python.org/​pypi/​gffutils ​ documentation:​ http://​pythonhosted.org/​gffutils
  
 And the following site tries to validate any of the arbitrarily pieced-together `GFF`s: And the following site tries to validate any of the arbitrarily pieced-together `GFF`s:
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 - http://​genometools.org/​cgi-bin/​gff3validator.cgi - http://​genometools.org/​cgi-bin/​gff3validator.cgi
  
-How come all these will-do "​standards"​ have become so widely adopted and every improvement always ​lead to even more confusion and more unparsable laissez-faire data junk. </​rant>​+How come all these will-do "​standards"​ have become so widely adopted and every improvement always ​leads to even more confusion and more unparsable laissez-faire data junk. </​rant>​